copper3d / Modules / Utils/segmentation/NrrdTools / NrrdTools
Class: NrrdTools
Utils/segmentation/NrrdTools.NrrdTools
Core NRRD annotation tool for medical image segmentation.
Acts as a Facade that delegates to composed modules:
- CanvasState — pure state container
- DrawToolCore — tool orchestration, event routing
- LayerChannelManager — layer/channel/sphere-type management
- SliceRenderPipeline — slice rendering, canvas flip, mask reload
- DataLoader — NRRD slice loading, legacy mask loading, NIfTI loading
No longer extends DrawToolCore — uses composition instead.
Example
// Default 3 layers: layer1, layer2, layer3
const tools = new NrrdTools(container);
// Custom layers
const tools = new NrrdTools(container, { layers: ["layer1", "layer2"] });// Default 3 layers: layer1, layer2, layer3
const tools = new NrrdTools(container);
// Custom layers
const tools = new NrrdTools(container, { layers: ["layer1", "layer2"] });Table of contents
Constructors
Properties
- _calculatorActive
- _pendingSliceStep
- _sliceRAFId
- container
- dataLoader
- dragOperator
- drawCore
- guiCallbacks
- guiParameterSettings
- layerChannelManager
- preTimer
- sliceRenderPipeline
- state
Accessors
Methods
- addSkip
- adjustContrast
- appendLoadingbar
- clearActiveLayer
- clearDictionary
- configMouseSliceWheel
- copyLayerData
- drag
- draw
- drawCalculatorSphereOnEachViews
- enableContrastDragEvents
- enterKeyboardConfig
- enterSphereMode
- executeAction
- exitKeyboardConfig
- exitSphereMode
- finishWindowAdjustment
- flipDisplayImageByAxis
- getActiveChannel
- getActiveLayer
- getActiveSphereType
- getBrushSize
- getChannelColor
- getChannelCssColor
- getChannelHexColor
- getChannelVisibility
- getContainer
- getCurrentImageDimension
- getCurrentSliceIndex
- getCurrentSlicesNumAndContrastNum
- getDrawingCanvas
- getIsShowContrastState
- getKeyboardSettings
- getLayerOpacity
- getLayerOpacityMap
- getLayerVisibility
- getMaskData
- getMaxSliceNum
- getMode
- getNrrdToolsSettings
- getOpacity
- getPencilColor
- getSliderMeta
- getSpaceOrigin
- getSphereBrushRadius
- getVoxelSpacing
- hasLayerData
- init
- initNrrdToolsModules
- isCalculatorActive
- isChannelVisible
- isContrastShortcutEnabled
- isLayerVisible
- redo
- redrawDisplayCanvas
- redrawMianPreOnDisplayCanvas
- refreshSphereOverlay
- reloadMasksFromVolume
- removeSkip
- reset
- resetChannelColors
- resetLayerCanvas
- resetPaintAreaUIPosition
- resizePaintArea
- setActiveChannel
- setActiveLayer
- setActiveSphereType
- setAllLayersChannelColor
- setAllSlices
- setBaseDrawDisplayCanvasesSize
- setBrushSize
- setCalculateDistanceSphere
- setChannelColor
- setChannelColors
- setChannelVisible
- setContrastShortcutEnabled
- setDisplaySliceIndexPanel
- setEmptyCanvasSize
- setEraserUrls
- setIsDrawFalse
- setKeyboardSettings
- setLayerOpacity
- setLayerVisible
- setMainAreaSize
- setMasksData
- setMasksFromNIfTI
- setMode
- setOpacity
- setPencilColor
- setPencilIconUrls
- setShowInMainArea
- setSliceMoving
- setSliceOrientation
- setSphereBrushRadius
- setSyncsliceNum
- setWindowHigh
- setWindowLow
- setupGUI
- switchAllSlicesArrayData
- switchSlicesPreservingView
- syncGuiParameterSettings
- undo
- updateMouseWheelEvent
- updateOriginAndChangedWH
- wireDrawCoreMethods
Constructors
constructor
• new NrrdTools(container, options?)
Parameters
| Name | Type |
|---|---|
container | HTMLDivElement |
options? | Object |
options.layers? | string[] |
Defined in
src/Utils/segmentation/NrrdTools.ts:97
Properties
_calculatorActive
• Private _calculatorActive: boolean = false
Whether calculator mode is active (not part of gui_states interface)
Defined in
src/Utils/segmentation/NrrdTools.ts:70
_pendingSliceStep
• Private _pendingSliceStep: number = 0
Defined in
src/Utils/segmentation/NrrdTools.ts:67
_sliceRAFId
• Private _sliceRAFId: null | number = null
Defined in
src/Utils/segmentation/NrrdTools.ts:66
container
• container: HTMLDivElement
Defined in
src/Utils/segmentation/NrrdTools.ts:55
dataLoader
• Private dataLoader: DataLoader
Data loading (extracted module)
Defined in
src/Utils/segmentation/NrrdTools.ts:79
dragOperator
• dragOperator: DragOperator
Drag operator for slice navigation.
Defined in
src/Utils/segmentation/NrrdTools.ts:62
drawCore
• Private drawCore: DrawToolCore
Core drawing tool orchestrator.
Defined in
src/Utils/segmentation/NrrdTools.ts:60
guiCallbacks
• Private guiCallbacks: null | { finishContrastAdjustment: () => void ; updateBrushAndEraserSize: () => void ; updateCalDistance: (val: "tumour" | "skin" | "nipple" | "ribcage") => void ; updateEraserState: () => void ; updatePencilState: () => void ; updateSphereState: () => void ; updateWindowHigh: (value: number) => void ; updateWindowLow: (value: number) => void } = null
Stored closure callbacks from gui.ts setupGui()
Defined in
src/Utils/segmentation/NrrdTools.ts:82
guiParameterSettings
• Private guiParameterSettings: undefined | IGuiParameterSettings
Defined in
src/Utils/segmentation/NrrdTools.ts:65
layerChannelManager
• Private layerChannelManager: LayerChannelManager
Layer/channel management (extracted module)
Defined in
src/Utils/segmentation/NrrdTools.ts:73
preTimer
• Private preTimer: any
Defined in
src/Utils/segmentation/NrrdTools.ts:64
sliceRenderPipeline
• Private sliceRenderPipeline: SliceRenderPipeline
Slice rendering pipeline (extracted module)
Defined in
src/Utils/segmentation/NrrdTools.ts:76
state
• Private state: CanvasState
Shared state container.
Defined in
src/Utils/segmentation/NrrdTools.ts:58
Accessors
start
• get start(): () => void
Get the DrawToolCore's start() render loop callback. This is called by DragSliceTool's requestAnimationFrame loop.
Returns
fn
▸ (): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:1177
Methods
addSkip
▸ addSkip(index): void
Parameters
| Name | Type |
|---|---|
index | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:783
adjustContrast
▸ adjustContrast(type, delta): void
Parameters
| Name | Type |
|---|---|
type | "windowLow" | "windowHigh" |
delta | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:416
appendLoadingbar
▸ appendLoadingbar(loadingbar): void
Parameters
| Name | Type |
|---|---|
loadingbar | HTMLDivElement |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:848
clearActiveLayer
▸ clearActiveLayer(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:1047
clearDictionary
▸ Private clearDictionary(dic): void
Parameters
| Name | Type |
|---|---|
dic | ISkipSlicesDictType |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:1167
configMouseSliceWheel
▸ configMouseSliceWheel(): (e: WheelEvent) => void
Returns
fn
▸ (e): void
Parameters
| Name | Type |
|---|---|
e | WheelEvent |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:1107
copyLayerData
▸ copyLayerData(sourceLayerId, targetLayerId): void
Copy all voxel data from one layer's MaskVolume to another.
After the copy the target layer's display is refreshed so the UI shows the updated data immediately. The target layer's color map is preserved — only the raw voxel buffer is overwritten.
Use case: when editing layer2 cascades to layer3 on the backend, call this to keep the frontend in sync without a network round-trip.
Parameters
| Name | Type | Description |
|---|---|---|
sourceLayerId | string | Layer to copy from (e.g. "layer2"). |
targetLayerId | string | Layer to copy into (e.g. "layer3"). |
Returns
void
Example
nrrdTools.copyLayerData("layer2", "layer3");nrrdTools.copyLayerData("layer2", "layer3");Defined in
src/Utils/segmentation/NrrdTools.ts:1206
drag
▸ drag(opts?): void
Parameters
| Name | Type |
|---|---|
opts? | IDragOpts |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:614
draw
▸ draw(opts?): void
Core drawing entry point.
Parameters
| Name | Type |
|---|---|
opts? | any |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:621
drawCalculatorSphereOnEachViews
▸ drawCalculatorSphereOnEachViews(axis): void
Expose drawCalculatorSphereOnEachViews for external use.
Parameters
| Name | Type |
|---|---|
axis | "z" | "y" | "x" |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:1184
enableContrastDragEvents
▸ enableContrastDragEvents(callback): void
Parameters
| Name | Type |
|---|---|
callback | (step: number, towards: "horizental" | "vertical") => void |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:642
enterKeyboardConfig
▸ enterKeyboardConfig(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:578
enterSphereMode
▸ enterSphereMode(): void
Enter sphere mode.
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:1011
executeAction
▸ executeAction(action, opts?): void
Parameters
| Name | Type |
|---|---|
action | "undo" | "redo" | "resetZoom" | "downloadCurrentMask" | "clearActiveSliceMask" | "clearActiveLayerMask" | "gaussianSmooth" |
opts? | Object |
opts.sigma? | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:475
exitKeyboardConfig
▸ exitKeyboardConfig(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:582
exitSphereMode
▸ exitSphereMode(): void
Exit sphere mode.
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:1030
finishWindowAdjustment
▸ finishWindowAdjustment(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:412
flipDisplayImageByAxis
▸ flipDisplayImageByAxis(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:957
getActiveChannel
▸ getActiveChannel(): number
Returns
number
Defined in
src/Utils/segmentation/NrrdTools.ts:922
getActiveLayer
▸ getActiveLayer(): string
Returns
string
Defined in
src/Utils/segmentation/NrrdTools.ts:920
getActiveSphereType
▸ getActiveSphereType(): SphereType
Returns
Defined in
src/Utils/segmentation/NrrdTools.ts:924
getBrushSize
▸ getBrushSize(): number
Returns
number
Defined in
src/Utils/segmentation/NrrdTools.ts:390
getChannelColor
▸ getChannelColor(layerId, channel): RGBAColor
Parameters
| Name | Type |
|---|---|
layerId | string |
channel | number |
Returns
RGBAColor
Defined in
src/Utils/segmentation/NrrdTools.ts:935
getChannelCssColor
▸ getChannelCssColor(layerId, channel): string
Parameters
| Name | Type |
|---|---|
layerId | string |
channel | number |
Returns
string
Defined in
src/Utils/segmentation/NrrdTools.ts:937
getChannelHexColor
▸ getChannelHexColor(layerId, channel): string
Parameters
| Name | Type |
|---|---|
layerId | string |
channel | number |
Returns
string
Defined in
src/Utils/segmentation/NrrdTools.ts:936
getChannelVisibility
▸ getChannelVisibility(): Record<string, Record<number, boolean>>
Returns
Record<string, Record<number, boolean>>
Defined in
src/Utils/segmentation/NrrdTools.ts:931
getContainer
▸ getContainer(): HTMLElement
Returns
HTMLElement
Defined in
src/Utils/segmentation/NrrdTools.ts:872
getCurrentImageDimension
▸ getCurrentImageDimension(): number[]
Returns
number[]
Defined in
src/Utils/segmentation/NrrdTools.ts:856
getCurrentSliceIndex
▸ getCurrentSliceIndex(): number
Returns
number
Defined in
src/Utils/segmentation/NrrdTools.ts:902
getCurrentSlicesNumAndContrastNum
▸ getCurrentSlicesNumAndContrastNum(): Object
Returns
Object
| Name | Type |
|---|---|
contrastIndex | number |
currentSliceIndex | number |
Defined in
src/Utils/segmentation/NrrdTools.ts:895
getDrawingCanvas
▸ getDrawingCanvas(): HTMLCanvasElement
Returns
HTMLCanvasElement
Defined in
src/Utils/segmentation/NrrdTools.ts:876
getIsShowContrastState
▸ getIsShowContrastState(): boolean
Returns
boolean
Defined in
src/Utils/segmentation/NrrdTools.ts:908
getKeyboardSettings
▸ getKeyboardSettings(): IKeyBoardSettings
Returns
IKeyBoardSettings
Defined in
src/Utils/segmentation/NrrdTools.ts:606
getLayerOpacity
▸ getLayerOpacity(layerId): number
Parameters
| Name | Type |
|---|---|
layerId | string |
Returns
number
Defined in
src/Utils/segmentation/NrrdTools.ts:944
getLayerOpacityMap
▸ getLayerOpacityMap(): Record<string, number>
Returns
Record<string, number>
Defined in
src/Utils/segmentation/NrrdTools.ts:945
getLayerVisibility
▸ getLayerVisibility(): Record<string, boolean>
Returns
Record<string, boolean>
Defined in
src/Utils/segmentation/NrrdTools.ts:930
getMaskData
▸ getMaskData(): IMaskData
Returns
IMaskData
Defined in
src/Utils/segmentation/NrrdTools.ts:868
getMaxSliceNum
▸ getMaxSliceNum(): number[]
Returns
number[]
Defined in
src/Utils/segmentation/NrrdTools.ts:884
getMode
▸ getMode(): ToolMode
Returns
ToolMode
Defined in
src/Utils/segmentation/NrrdTools.ts:363
getNrrdToolsSettings
▸ getNrrdToolsSettings(): NrrdState
Returns
Defined in
src/Utils/segmentation/NrrdTools.ts:880
getOpacity
▸ getOpacity(): number
Returns
number
Defined in
src/Utils/segmentation/NrrdTools.ts:381
getPencilColor
▸ getPencilColor(): string
Returns
string
Defined in
src/Utils/segmentation/NrrdTools.ts:471
getSliderMeta
▸ getSliderMeta(key): null | IGuiMeta
Parameters
| Name | Type |
|---|---|
key | string |
Returns
null | IGuiMeta
Defined in
src/Utils/segmentation/NrrdTools.ts:433
getSpaceOrigin
▸ getSpaceOrigin(): number[]
Returns
number[]
Defined in
src/Utils/segmentation/NrrdTools.ts:864
getSphereBrushRadius
▸ getSphereBrushRadius(): number
Returns
number
Defined in
src/Utils/segmentation/NrrdTools.ts:398
getVoxelSpacing
▸ getVoxelSpacing(): number[]
Returns
number[]
Defined in
src/Utils/segmentation/NrrdTools.ts:860
hasLayerData
▸ hasLayerData(layerId): boolean
Parameters
| Name | Type |
|---|---|
layerId | string |
Returns
boolean
Defined in
src/Utils/segmentation/NrrdTools.ts:932
init
▸ Private init(): void
A initialise function for nrrd_tools
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:165
initNrrdToolsModules
▸ Private initNrrdToolsModules(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:175
isCalculatorActive
▸ isCalculatorActive(): boolean
Returns
boolean
Defined in
src/Utils/segmentation/NrrdTools.ts:373
isChannelVisible
▸ isChannelVisible(layerId, channel): boolean
Parameters
| Name | Type |
|---|---|
layerId | string |
channel | ChannelValue |
Returns
boolean
Defined in
src/Utils/segmentation/NrrdTools.ts:929
isContrastShortcutEnabled
▸ isContrastShortcutEnabled(): boolean
Returns
boolean
Defined in
src/Utils/segmentation/NrrdTools.ts:590
isLayerVisible
▸ isLayerVisible(layerId): boolean
Parameters
| Name | Type |
|---|---|
layerId | string |
Returns
boolean
Defined in
src/Utils/segmentation/NrrdTools.ts:927
redo
▸ redo(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:574
redrawDisplayCanvas
▸ redrawDisplayCanvas(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:959
redrawMianPreOnDisplayCanvas
▸ redrawMianPreOnDisplayCanvas(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:955
refreshSphereOverlay
▸ Private refreshSphereOverlay(): void
Refresh sphere canvas from sphereMaskVolume for the current slice/axis.
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:1004
reloadMasksFromVolume
▸ Private reloadMasksFromVolume(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:960
removeSkip
▸ removeSkip(index): void
Parameters
| Name | Type |
|---|---|
index | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:795
reset
▸ reset(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:1061
resetChannelColors
▸ resetChannelColors(layerId?, channel?): void
Parameters
| Name | Type |
|---|---|
layerId? | string |
channel? | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:940
resetLayerCanvas
▸ resetLayerCanvas(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:954
resetPaintAreaUIPosition
▸ resetPaintAreaUIPosition(l?, t?): void
Parameters
| Name | Type |
|---|---|
l? | number |
t? | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:953
resizePaintArea
▸ resizePaintArea(factor): void
Parameters
| Name | Type |
|---|---|
factor | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:956
setActiveChannel
▸ setActiveChannel(channel): void
Parameters
| Name | Type |
|---|---|
channel | ChannelValue |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:921
setActiveLayer
▸ setActiveLayer(layerId): void
Parameters
| Name | Type |
|---|---|
layerId | string |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:916
setActiveSphereType
▸ setActiveSphereType(type): void
Parameters
| Name | Type |
|---|---|
type | SphereType |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:923
setAllLayersChannelColor
▸ setAllLayersChannelColor(channel, color): void
Parameters
| Name | Type |
|---|---|
channel | number |
color | RGBAColor |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:939
setAllSlices
▸ setAllSlices(allSlices): void
Parameters
| Name | Type |
|---|---|
allSlices | nrrdSliceType[] |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:966
setBaseDrawDisplayCanvasesSize
▸ setBaseDrawDisplayCanvasesSize(size): void
Set the Draw Display Canvas base size
Parameters
| Name | Type |
|---|---|
size | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:628
setBrushSize
▸ setBrushSize(size): void
Parameters
| Name | Type |
|---|---|
size | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:385
setCalculateDistanceSphere
▸ setCalculateDistanceSphere(x, y, sliceIndex, cal_position): void
Parameters
| Name | Type |
|---|---|
x | number |
y | number |
sliceIndex | number |
cal_position | "tumour" | "skin" | "nipple" | "ribcage" |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:974
setChannelColor
▸ setChannelColor(layerId, channel, color): void
Parameters
| Name | Type |
|---|---|
layerId | string |
channel | number |
color | RGBAColor |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:934
setChannelColors
▸ setChannelColors(layerId, colorMap): void
Parameters
| Name | Type |
|---|---|
layerId | string |
colorMap | Partial<ChannelColorMap> |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:938
setChannelVisible
▸ setChannelVisible(layerId, channel, visible): void
Parameters
| Name | Type |
|---|---|
layerId | string |
channel | ChannelValue |
visible | boolean |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:928
setContrastShortcutEnabled
▸ setContrastShortcutEnabled(enabled): void
Parameters
| Name | Type |
|---|---|
enabled | boolean |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:586
setDisplaySliceIndexPanel
▸ setDisplaySliceIndexPanel(panel): void
Parameters
| Name | Type |
|---|---|
panel | HTMLDivElement |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:638
setEmptyCanvasSize
▸ setEmptyCanvasSize(axis?): void
Parameters
| Name | Type |
|---|---|
axis? | "z" | "y" | "x" |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:958
setEraserUrls
▸ setEraserUrls(urls): void
Parameters
| Name | Type |
|---|---|
urls | string[] |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:646
setIsDrawFalse
▸ setIsDrawFalse(target): void
Parameters
| Name | Type |
|---|---|
target | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:1153
setKeyboardSettings
▸ setKeyboardSettings(settings): void
Parameters
| Name | Type |
|---|---|
settings | Partial<IKeyBoardSettings> |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:594
setLayerOpacity
▸ setLayerOpacity(layerId, opacity): void
Parameters
| Name | Type |
|---|---|
layerId | string |
opacity | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:943
setLayerVisible
▸ setLayerVisible(layerId, visible): void
Parameters
| Name | Type |
|---|---|
layerId | string |
visible | boolean |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:926
setMainAreaSize
▸ setMainAreaSize(factor): void
Parameters
| Name | Type |
|---|---|
factor | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:820
setMasksData
▸ setMasksData(masksData, loadingBar?): void
Parameters
| Name | Type |
|---|---|
masksData | storeExportPaintImageType |
loadingBar? | loadingBarType |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:967
setMasksFromNIfTI
▸ setMasksFromNIfTI(layerVoxels, loadingBar?): void
Parameters
| Name | Type |
|---|---|
layerVoxels | Map<string, Uint8Array> |
loadingBar? | loadingBarType |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:968
setMode
▸ setMode(mode): void
Set the current tool mode.
Parameters
| Name | Type |
|---|---|
mode | ToolMode |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:292
setOpacity
▸ setOpacity(value): void
Parameters
| Name | Type |
|---|---|
value | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:377
setPencilColor
▸ setPencilColor(hex): void
Parameters
| Name | Type |
|---|---|
hex | string |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:467
setPencilIconUrls
▸ setPencilIconUrls(urls): void
Parameters
| Name | Type |
|---|---|
urls | string[] |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:650
setShowInMainArea
▸ Private setShowInMainArea(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:1163
setSliceMoving
▸ setSliceMoving(step): void
Parameters
| Name | Type |
|---|---|
step | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:801
setSliceOrientation
▸ setSliceOrientation(axisTo): void
Switch all contrast slices' orientation
Parameters
| Name | Type |
|---|---|
axisTo | "z" | "y" | "x" |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:657
setSphereBrushRadius
▸ setSphereBrushRadius(radius): void
Parameters
| Name | Type |
|---|---|
radius | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:394
setSyncsliceNum
▸ setSyncsliceNum(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:952
setWindowHigh
▸ setWindowHigh(value): void
Parameters
| Name | Type |
|---|---|
value | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:402
setWindowLow
▸ setWindowLow(value): void
Parameters
| Name | Type |
|---|---|
value | number |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:407
setupGUI
▸ setupGUI(gui): void
Set up GUI for drawing panel
Parameters
| Name | Type | Description |
|---|---|---|
gui | GUI | GUI |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:221
switchAllSlicesArrayData
▸ switchAllSlicesArrayData(allSlices): void
Parameters
| Name | Type |
|---|---|
allSlices | nrrdSliceType[] |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:832
switchSlicesPreservingView
▸ switchSlicesPreservingView(allSlices): void
Swap slice data while preserving current slice index, zoom, and pan position. Used for register/origin image switching where the view state should persist.
Parameters
| Name | Type |
|---|---|
allSlices | nrrdSliceType[] |
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:842
syncGuiParameterSettings
▸ Private syncGuiParameterSettings(): void
Sync guiParameterSettings with current volume metadata.
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:277
undo
▸ undo(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:570
updateMouseWheelEvent
▸ updateMouseWheelEvent(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:1127
updateOriginAndChangedWH
▸ updateOriginAndChangedWH(): void
Returns
void
Defined in
src/Utils/segmentation/NrrdTools.ts:951
wireDrawCoreMethods
▸ Private wireDrawCoreMethods(): void
Wire DrawToolCore's overridable methods to NrrdTools implementations. This replaces the old inheritance approach.
Returns
void