copper3d / Modules / Utils/segmentation/NrrdTools / NrrdTools

Class: NrrdTools ​

Utils/segmentation/NrrdTools.NrrdTools

Hierarchy ​

• DrawToolCore

  ↳ NrrdTools

Table of contents ​

Constructors ​

• constructor

Properties ​

• baseCanvasesSize
• container
• contrastEventPrameters
• cursorPage
• dragOperator
• drawingPrameters
• eraserUrls
• guiParameterSettings
• gui_states
• initState
• mainAreaContainer
• nrrd_states
• paintedImage
• pencilUrls
• preTimer
• protectedData
• start
• storedPaintImages
• undoArray

Methods ​

• addSkip
• afterLoadSlice
• appendLoadingbar
• checkSharedPlaceSlice
• clear
• clearDictionary
• clearPaint
• clearStoreImages
• configContrastDragMode
• configMouseSliceWheel
• configMouseZoomWheel
• convertCursorPoint
• createEmptyPaintImage
• drag
• draw
• drawCalSphereDown
• drawCalSphereUp
• drawCalculatorSphere
• drawCalculatorSphereOnEachViews
• drawImageOnEmptyImage
• drawSphere
• enableContrastDragEvents
• filterDrawedImage
• findSliceInSharedPlace
• flipDisplayImageByAxis
• getContainer
• getCurrentImageDimension
• getCurrentSliceIndex
• getCurrentSlicesNumAndContrastNum
• getDrawingCanvas
• getGuiSettings
• getIsShowContrastState
• getMaskData
• getMaxSliceNum
• getNrrdToolsSettings
• getRestLabel
• getSharedPlace
• getSpaceOrigin
• getVoxelSpacing
• init
• initPaintImages
• loadDisplaySlicesArray
• loadingMaskByLabel
• redrawDisplayCanvas
• redrawMianPreOnDisplayCanvas
• reloadMaskToLabel
• removeContrastDragMode
• removeSkip
• replaceArray
• replaceHorizontalRowPixels
• replaceVerticalColPixels
• repraintCurrentContrastSlice
• resetDisplaySlicesStatus
• resetLayerCanvas
• resetPaintAreaUIPosition
• resizePaintArea
• setAllSlices
• setBaseDrawDisplayCanvasesSize
• setCalculateDistanceSphere
• setDisplaySliceIndexPanel
• setDisplaySlicesBaseOnAxis
• setEmptyCanvasSize
• setEraserUrls
• setIsDrawFalse
• setMainAreaSize
• setMainPreSlice
• setMasksData
• setOriginCanvasAndPre
• setPencilIconUrls
• setShowInMainArea
• setSliceMoving
• setSliceOrientation
• setSyncsliceNum
• setupConfigs
• setupConrastEvents
• setupGUI
• sliceArrayH
• sliceArrayV
• storeAllImages
• storeEachLayerImage
• storeImageToAxis
• storeImageToLabel
• switchAllSlicesArrayData
• undoLastPainting
• updateMaxIndex
• updateMouseWheelEvent
• updateOriginAndChangedWH
• updateSlicesContrast

Constructors ​

constructor ​

• new NrrdTools(container)

Parameters ​

Overrides ​

DrawToolCore.constructor

Defined in ​

src/Utils/segmentation/NrrdTools.ts:36

Properties ​

baseCanvasesSize ​

• baseCanvasesSize: number = 1

Inherited from ​

DrawToolCore.baseCanvasesSize

Defined in ​

src/Utils/segmentation/CommToolsData.ts:15

container ​

• container: HTMLDivElement

Overrides ​

DrawToolCore.container

Defined in ​

src/Utils/segmentation/NrrdTools.ts:24

contrastEventPrameters ​

• contrastEventPrameters: IContrastEvents

Inherited from ​

DrawToolCore.contrastEventPrameters

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:29

cursorPage ​

• cursorPage: ICursorPage

Inherited from ​

DrawToolCore.cursorPage

Defined in ​

src/Utils/segmentation/CommToolsData.ts:90

dragOperator ​

• dragOperator: DragOperator

Defined in ​

src/Utils/segmentation/NrrdTools.ts:27

drawingPrameters ​

• drawingPrameters: IDrawingEvents

Inherited from ​

DrawToolCore.drawingPrameters

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:18

eraserUrls ​

• eraserUrls: string[] = []

Inherited from ​

DrawToolCore.eraserUrls

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:42

guiParameterSettings ​

• Private guiParameterSettings: undefined | IGuiParameterSettings

Defined in ​

src/Utils/segmentation/NrrdTools.ts:34

gui_states ​

• gui_states: IGUIStates

Inherited from ​

DrawToolCore.gui_states

Defined in ​

src/Utils/segmentation/CommToolsData.ts:111

initState ​

• Private initState: boolean = true

Defined in ​

src/Utils/segmentation/NrrdTools.ts:32

mainAreaContainer ​

• mainAreaContainer: HTMLDivElement

Inherited from ​

DrawToolCore.mainAreaContainer

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:17

nrrd_states ​

• nrrd_states: INrrdStates

Inherited from ​

DrawToolCore.nrrd_states

Defined in ​

src/Utils/segmentation/CommToolsData.ts:16

paintedImage ​

• Private paintedImage: undefined | IPaintImage

Defined in ​

src/Utils/segmentation/NrrdTools.ts:30

pencilUrls ​

• pencilUrls: string[] = []

Inherited from ​

DrawToolCore.pencilUrls

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:43

preTimer ​

• Private preTimer: any

Defined in ​

src/Utils/segmentation/NrrdTools.ts:33

protectedData ​

• protectedData: IProtected

Inherited from ​

DrawToolCore.protectedData

Defined in ​

src/Utils/segmentation/CommToolsData.ts:163

start ​

• start: () => void

Type declaration ​

▸ (): void

Returns ​

void

Inherited from ​

DrawToolCore.start

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:47

storedPaintImages ​

• storedPaintImages: undefined | IStoredPaintImages

Defined in ​

src/Utils/segmentation/NrrdTools.ts:28

undoArray ​

• undoArray: IUndoType[] = []

Inherited from ​

DrawToolCore.undoArray

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:44

Methods ​

addSkip ​

▸ addSkip(index): void

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:606

afterLoadSlice ​

▸ Private afterLoadSlice(): void

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:841

appendLoadingbar ​

▸ appendLoadingbar(loadingbar): void

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:900

checkSharedPlaceSlice ​

▸ checkSharedPlaceSlice(width, height, imageData): Uint8ClampedArray

**************************** Utils for store image and itksnap core *************************************

Parameters ​

Returns ​

Uint8ClampedArray

Inherited from ​

DrawToolCore.checkSharedPlaceSlice

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1953

clear ​

▸ clear(): void

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:624

clearDictionary ​

▸ Private clearDictionary(dic): void

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:1139

clearPaint ​

▸ clearPaint(): void

Clear mask on current slice canvas

Returns ​

void

Inherited from ​

DrawToolCore.clearPaint

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1488

clearStoreImages ​

▸ clearStoreImages(): void

Rewrite this {clearStoreImages} function under NrrdTools

Returns ​

void

Overrides ​

DrawToolCore.clearStoreImages

Defined in ​

src/Utils/segmentation/NrrdTools.ts:904

configContrastDragMode ​

▸ configContrastDragMode(): void

Returns ​

void

Inherited from ​

DrawToolCore.configContrastDragMode

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:2098

configMouseSliceWheel ​

▸ configMouseSliceWheel(): (e: WheelEvent) => void

Config mouse slice wheel event.

Returns ​

fn

▸ (e): void

Parameters ​

Returns ​

void

Overrides ​

DrawToolCore.configMouseSliceWheel

Defined in ​

src/Utils/segmentation/NrrdTools.ts:1210

configMouseZoomWheel ​

▸ configMouseZoomWheel(): (e: WheelEvent) => void

Returns ​

fn

▸ (e): void

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.configMouseZoomWheel

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:973

convertCursorPoint ​

▸ convertCursorPoint(from, to, cursorNumX, cursorNumY, currentSliceIndex): undefined | { convertCursorNumX: number ; convertCursorNumY: number ; currentIndex: number ; oldIndex: number }

We generate the MRI slice from threejs based on mm, but when we display it is based on pixel size/distance. So, the index munber on each axis (sagittal, axial, coronal) is the slice's depth in mm distance. And the width and height displayed on screen is the slice's width and height in pixel distance.

When we switch into different axis' views, we need to convert current view's the depth to the pixel distance in other views width or height, and convert the current view's width or height from pixel distance to mm distance as other views' depth (slice index) in general.

Then as for the crosshair (Cursor Inspector), we also need to convert the cursor point (x, y, z) to other views' (x, y, z).

Parameters ​

Returns ​

undefined | { convertCursorNumX: number ; convertCursorNumY: number ; currentIndex: number ; oldIndex: number }

Inherited from ​

DrawToolCore.convertCursorPoint

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1331

createEmptyPaintImage ​

▸ createEmptyPaintImage(dimensions, paintImages): void

Rewrite this {createEmptyPaintImage} function under NrrdTools

Parameters ​

Returns ​

void

Overrides ​

DrawToolCore.createEmptyPaintImage

Defined in ​

src/Utils/segmentation/NrrdTools.ts:407

drag ​

▸ drag(opts?): void

core function for drag slices

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:67

draw ​

▸ draw(opts?): void

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.draw

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:148

drawCalSphereDown ​

▸ drawCalSphereDown(x, y, sliceIndex, cal_position): void

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.drawCalSphereDown

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:157

drawCalSphereUp ​

▸ drawCalSphereUp(): void

Returns ​

void

Inherited from ​

DrawToolCore.drawCalSphereUp

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:202

drawCalculatorSphere ​

▸ drawCalculatorSphere(radius): void

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.drawCalculatorSphere

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1245

drawCalculatorSphereOnEachViews ​

▸ drawCalculatorSphereOnEachViews(axis): void

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.drawCalculatorSphereOnEachViews

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1079

drawImageOnEmptyImage ​

▸ drawImageOnEmptyImage(canvas): void

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.drawImageOnEmptyImage

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1060

drawSphere ​

▸ drawSphere(mouseX, mouseY, radius): void

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.drawSphere

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1276

enableContrastDragEvents ​

▸ enableContrastDragEvents(callback): void

Enable the drag function for contrast images window center and window high.

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:101

filterDrawedImage ​

▸ filterDrawedImage(axis, sliceIndex, paintedImages): IPaintImage

Get a painted mask image (IPaintImage) based on current axis and input slice index.

Parameters ​

Returns ​

IPaintImage

Inherited from ​

DrawToolCore.filterDrawedImage

Defined in ​

src/Utils/segmentation/CommToolsData.ts:362

findSliceInSharedPlace ​

▸ findSliceInSharedPlace(): ImageData[]

Returns ​

ImageData[]

Inherited from ​

DrawToolCore.findSliceInSharedPlace

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1993

flipDisplayImageByAxis ​

▸ flipDisplayImageByAxis(): void

flip the canvas to a correct position. This is because the slice canvas from threejs is not in a correct 2D postion. Thus, everytime when we redraw the display canvas, we need to flip to draw the origin canvas from threejs. Under different axis(sagittal, Axial, Coronal), the flip orientation is different.

Returns ​

void

Overrides ​

DrawToolCore.flipDisplayImageByAxis

Defined in ​

src/Utils/segmentation/NrrdTools.ts:1116

getContainer ​

▸ getContainer(): HTMLElement

Returns ​

HTMLElement

Defined in ​

src/Utils/segmentation/NrrdTools.ts:693

getCurrentImageDimension ​

▸ getCurrentImageDimension(): number[]

Returns ​

number[]

Defined in ​

src/Utils/segmentation/NrrdTools.ts:333

getCurrentSliceIndex ​

▸ getCurrentSliceIndex(): number

Returns ​

number

Defined in ​

src/Utils/segmentation/NrrdTools.ts:720

getCurrentSlicesNumAndContrastNum ​

▸ getCurrentSlicesNumAndContrastNum(): Object

Returns ​

Object

Defined in ​

src/Utils/segmentation/NrrdTools.ts:713

getDrawingCanvas ​

▸ getDrawingCanvas(): HTMLCanvasElement

Returns ​

HTMLCanvasElement

Defined in ​

src/Utils/segmentation/NrrdTools.ts:696

getGuiSettings ​

▸ getGuiSettings(): Object

Returns ​

Object

Defined in ​

src/Utils/segmentation/NrrdTools.ts:159

getIsShowContrastState ​

▸ getIsShowContrastState(): boolean

Returns ​

boolean

Defined in ​

src/Utils/segmentation/NrrdTools.ts:726

getMaskData ​

▸ getMaskData(): IMaskData

Returns ​

IMaskData

Defined in ​

src/Utils/segmentation/NrrdTools.ts:343

getMaxSliceNum ​

▸ getMaxSliceNum(): number[]

Returns ​

number[]

Defined in ​

src/Utils/segmentation/NrrdTools.ts:703

getNrrdToolsSettings ​

▸ getNrrdToolsSettings(): INrrdStates

Returns ​

INrrdStates

Defined in ​

src/Utils/segmentation/NrrdTools.ts:699

getRestLabel ​

▸ getRestLabel(): ("label1" | "label2" | "label3")[]

label div controls*************************

Returns ​

("label1" | "label2" | "label3")[]

Inherited from ​

DrawToolCore.getRestLabel

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1469

getSharedPlace ​

▸ Private getSharedPlace(len, ratio): number[]

Parameters ​

Returns ​

number[]

Defined in ​

src/Utils/segmentation/NrrdTools.ts:363

getSpaceOrigin ​

▸ getSpaceOrigin(): number[]

Returns ​

number[]

Defined in ​

src/Utils/segmentation/NrrdTools.ts:340

getVoxelSpacing ​

▸ getVoxelSpacing(): number[]

Returns ​

number[]

Defined in ​

src/Utils/segmentation/NrrdTools.ts:337

init ​

▸ Private init(): void

A initialise function for nrrd_tools

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:176

initPaintImages ​

▸ Private initPaintImages(dimensions): void

init all painted images for store images

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:388

loadDisplaySlicesArray ​

▸ Private loadDisplaySlicesArray(): void

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:759

loadingMaskByLabel ​

▸ Private loadingMaskByLabel(masks, index, imageData): ImageData

Parameters ​

Returns ​

ImageData

Defined in ​

src/Utils/segmentation/NrrdTools.ts:248

redrawDisplayCanvas ​

▸ redrawDisplayCanvas(): void

Redraw current contrast image to display canvas. It is more related to change the contrast slice image's window width or center.

Returns ​

void

Overrides ​

DrawToolCore.redrawDisplayCanvas

Defined in ​

src/Utils/segmentation/NrrdTools.ts:1179

redrawMianPreOnDisplayCanvas ​

▸ redrawMianPreOnDisplayCanvas(): void

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:957

reloadMaskToLabel ​

▸ Private reloadMaskToLabel(paintImages, ctx): void

Used to init the mask on each label and reload

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:1055

removeContrastDragMode ​

▸ removeContrastDragMode(): void

Returns ​

void

Inherited from ​

DrawToolCore.removeContrastDragMode

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:2112

removeSkip ​

▸ removeSkip(index): void

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:618

replaceArray ​

▸ replaceArray(mainArr, replaceArr): void

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.replaceArray

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1980

replaceHorizontalRowPixels ​

▸ replaceHorizontalRowPixels(paintImageArray, length, ratio, markedArr, targetWidth, convertIndex): void

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.replaceHorizontalRowPixels

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1932

replaceVerticalColPixels ​

▸ replaceVerticalColPixels(paintImageArray, length, ratio, markedArr, targetWidth, convertIndex): void

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.replaceVerticalColPixels

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1899

repraintCurrentContrastSlice ​

▸ repraintCurrentContrastSlice(): void

Returns ​

void

Inherited from ​

DrawToolCore.repraintCurrentContrastSlice

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:2162

resetDisplaySlicesStatus ​

▸ Private resetDisplaySlicesStatus(): void

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:786

resetLayerCanvas ​

▸ resetLayerCanvas(): void

Clear masks on drawingCanvas layers.

Returns ​

void

Overrides ​

DrawToolCore.resetLayerCanvas

Defined in ​

src/Utils/segmentation/NrrdTools.ts:946

resetPaintAreaUIPosition ​

▸ resetPaintAreaUIPosition(l?, t?): void

Reset the draw and display canvases layout after mouse pan. If no params in, then center the draw and display canvases.

Parameters ​

Returns ​

void

Overrides ​

DrawToolCore.resetPaintAreaUIPosition

Defined in ​

src/Utils/segmentation/NrrdTools.ts:926

resizePaintArea ​

▸ resizePaintArea(factor): void

Resize the draw and display canvas size based on the input size factor number.

Parameters ​

Returns ​

void

Overrides ​

DrawToolCore.resizePaintArea

Defined in ​

src/Utils/segmentation/NrrdTools.ts:985

setAllSlices ​

▸ setAllSlices(allSlices): void

entry function

• { x:slice, y:slice, z:slice }

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:198

setBaseDrawDisplayCanvasesSize ​

▸ setBaseDrawDisplayCanvasesSize(size): void

Set the Draw Display Canvas base size

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:83

setCalculateDistanceSphere ​

▸ setCalculateDistanceSphere(x, y, sliceIndex, cal_position): void

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:348

setDisplaySliceIndexPanel ​

▸ setDisplaySliceIndexPanel(panel): void

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:93

setDisplaySlicesBaseOnAxis ​

▸ Private setDisplaySlicesBaseOnAxis(): void

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:746

setEmptyCanvasSize ​

▸ setEmptyCanvasSize(axis?): void

Set the empty canvas width and height based on the axis (pixel distance not the mm), to reduce duplicate codes.

Parameters ​

Returns ​

void

Overrides ​

DrawToolCore.setEmptyCanvasSize

Defined in ​

src/Utils/segmentation/NrrdTools.ts:1150

setEraserUrls ​

▸ setEraserUrls(urls): void

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.setEraserUrls

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:111

setIsDrawFalse ​

▸ setIsDrawFalse(target): void

Give a delay time to finish the last drawing before upcoming interrupt opreations. Give a delay time number (ms) to disable the draw function, After your interrupt opeartion, you should enable the draw fucntion.

Parameters ​

Returns ​

void

Overrides ​

DrawToolCore.setIsDrawFalse

Defined in ​

src/Utils/segmentation/NrrdTools.ts:736

setMainAreaSize ​

▸ setMainAreaSize(factor): void

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:680

setMainPreSlice ​

▸ Private setMainPreSlice(): void

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:810

setMasksData ​

▸ setMasksData(masksData, loadingBar?): void

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:265

setOriginCanvasAndPre ​

▸ Private setOriginCanvasAndPre(): void

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:817

setPencilIconUrls ​

▸ setPencilIconUrls(urls): void

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.setPencilIconUrls

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:114

setShowInMainArea ​

▸ Private setShowInMainArea(): void

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:329

setSliceMoving ​

▸ setSliceMoving(step): void

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:671

setSliceOrientation ​

▸ setSliceOrientation(axisTo): void

Switch all contrast slices' orientation

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:452

setSyncsliceNum ​

▸ setSyncsliceNum(): void

Keep all contrast slice index to same. Synchronize the slice indexes of all the contrasts so that they are consistent with the main slice's index.

Returns ​

void

Overrides ​

DrawToolCore.setSyncsliceNum

Defined in ​

src/Utils/segmentation/NrrdTools.ts:892

setupConfigs ​

▸ Private setupConfigs(): void

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:793

setupConrastEvents ​

▸ setupConrastEvents(callback): void

Set up root container events fns for drag function

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.setupConrastEvents

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:2045

setupGUI ​

▸ setupGUI(gui): void

Set up GUI for drawing panel

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:109

sliceArrayH ​

▸ sliceArrayH(arr, row, col): Uint8ClampedArray[]

Parameters ​

Returns ​

Uint8ClampedArray[]

Inherited from ​

DrawToolCore.sliceArrayH

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1861

sliceArrayV ​

▸ sliceArrayV(arr, row, col): number[][]

Parameters ​

Returns ​

number[][]

Inherited from ​

DrawToolCore.sliceArrayV

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1872

storeAllImages ​

▸ storeAllImages(index, label): void

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.storeAllImages

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1618

storeEachLayerImage ​

▸ storeEachLayerImage(index, label): void

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.storeEachLayerImage

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1819

storeImageToAxis ​

▸ storeImageToAxis(index, paintedImages, imageData, axis?): void

Store images*************************

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.storeImageToAxis

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1584

storeImageToLabel ​

▸ storeImageToLabel(index, canvas, paintedImages): ImageData

Parameters ​

Returns ​

ImageData

Inherited from ​

DrawToolCore.storeImageToLabel

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1799

switchAllSlicesArrayData ​

▸ switchAllSlicesArrayData(allSlices): void

Parameters ​

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:780

undoLastPainting ​

▸ undoLastPainting(): void

Rewrite this {undoLastPainting} function under DrawToolCore

Returns ​

void

Inherited from ​

DrawToolCore.undoLastPainting

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:1507

updateMaxIndex ​

▸ Private updateMaxIndex(): void

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:861

updateMouseWheelEvent ​

▸ updateMouseWheelEvent(): void

Update mouse wheel event.

Returns ​

void

Defined in ​

src/Utils/segmentation/NrrdTools.ts:1228

updateOriginAndChangedWH ​

▸ updateOriginAndChangedWH(): void

Update the original canvas size, allow set to threejs load one (pixel distance not the mm). Then update the changedWidth and changedHeight based on the sizeFoctor.

Returns ​

void

Overrides ​

DrawToolCore.updateOriginAndChangedWH

Defined in ​

src/Utils/segmentation/NrrdTools.ts:871

updateSlicesContrast ​

▸ updateSlicesContrast(value, flag): void

Parameters ​

Returns ​

void

Inherited from ​

DrawToolCore.updateSlicesContrast

Defined in ​

src/Utils/segmentation/DrawToolCore.ts:2136