copper3d / Modules / Loader/copperNrrdLoader / NrrdVolume

Interface: NrrdVolume ​

Loader/copperNrrdLoader.NrrdVolume

The NRRD volume this engine passes around: three.js's Volume plus the fields NRRDLoader.parse() attaches to it, with matrix widened to the 4x4 affine an NRRD actually carries -- three declares that member as a Matrix3.

Hierarchy ​

• Omit<Volume, "matrix">

  ↳ NrrdVolume

Table of contents ​

Properties ​

• RASDimensions
• axisOrder
• data
• dimensions
• header
• inverseMatrix
• lowerThreshold
• matrix
• max
• min
• offset
• orientation
• segmentation
• sliceList
• spacing
• upperThreshold
• windowHigh
• windowLow
• xLength
• yLength
• zLength

Methods ​

• access
• computeMinMax
• extractPerpendicularPlane
• extractSlice
• getData
• map
• repaintAllSlices
• reverseAccess

Properties ​

RASDimensions ​

• RASDimensions: number[]

Defined in ​

src/Loader/copperNrrdLoader.ts:182

axisOrder ​

• axisOrder: ("x" | "y" | "z")[]

Inherited from ​

Omit.axisOrder

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:12

data ​

• data: TypedArray

Inherited from ​

Omit.data

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:14

dimensions ​

• dimensions: number[]

Defined in ​

src/Loader/copperNrrdLoader.ts:179

header ​

• header: any

Defined in ​

src/Loader/copperNrrdLoader.ts:177

inverseMatrix ​

• inverseMatrix: Matrix4

Defined in ​

src/Loader/copperNrrdLoader.ts:181

lowerThreshold ​

• lowerThreshold: number

Inherited from ​

Omit.lowerThreshold

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:21

matrix ​

• matrix: Matrix4

Defined in ​

src/Loader/copperNrrdLoader.ts:180

max ​

• max: number

Defined in ​

src/Loader/copperNrrdLoader.ts:184

min ​

• min: number

Defined in ​

src/Loader/copperNrrdLoader.ts:183

offset ​

• offset: number[]

Inherited from ​

Omit.offset

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:17

orientation ​

• orientation: VolumeOrientation

How the file reached the canonical voxel order, and its canonical grid in patient space.

Defined in ​

src/Loader/copperNrrdLoader.ts:188

segmentation ​

• segmentation: boolean

Defined in ​

src/Loader/copperNrrdLoader.ts:178

sliceList ​

• sliceList: VolumeSlice[]

Inherited from ​

Omit.sliceList

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:24

spacing ​

• spacing: number[]

Inherited from ​

Omit.spacing

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:16

upperThreshold ​

• upperThreshold: number

Inherited from ​

Omit.upperThreshold

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:22

windowHigh ​

• windowHigh: number

Defined in ​

src/Loader/copperNrrdLoader.ts:186

windowLow ​

• windowLow: number

Defined in ​

src/Loader/copperNrrdLoader.ts:185

xLength ​

• xLength: number

Inherited from ​

Omit.xLength

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:8

yLength ​

• yLength: number

Inherited from ​

Omit.yLength

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:9

zLength ​

• zLength: number

Inherited from ​

Omit.zLength

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:10

Methods ​

access ​

▸ access(i, j, k): number

Parameters ​

Returns ​

number

Inherited from ​

Omit.access

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:27

computeMinMax ​

▸ computeMinMax(): number[]

Returns ​

number[]

Inherited from ​

Omit.computeMinMax

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:36

extractPerpendicularPlane ​

▸ extractPerpendicularPlane(axis, RASIndex): object

Parameters ​

Returns ​

object

Inherited from ​

Omit.extractPerpendicularPlane

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:32

extractSlice ​

▸ extractSlice(axis, index): VolumeSlice

Parameters ​

Returns ​

VolumeSlice

Inherited from ​

Omit.extractSlice

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:33

getData ​

▸ getData(i, j, k): number

Parameters ​

Returns ​

number

Inherited from ​

Omit.getData

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:26

map ​

▸ map(functionToMap, context): Volume

Parameters ​

Returns ​

Volume

Inherited from ​

Omit.map

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:30

repaintAllSlices ​

▸ repaintAllSlices(): Volume

Returns ​

Volume

Inherited from ​

Omit.repaintAllSlices

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:35

reverseAccess ​

▸ reverseAccess(index): number[]

Parameters ​

Returns ​

number[]

Inherited from ​

Omit.reverseAccess

Defined in ​

node_modules/@types/three/examples/jsm/misc/Volume.d.ts:28